I need to classify central galaxies of satellite galaxies, in the documentation say that this information is in Supplementary Data Catalogs, Molecular and atomic hydrogen (HI+H2) galaxy contents, is_primary and is availble for TNG100-1, TNG100-2, TNG300-1, and Illustris-1. I download Illustris-1, but in this file (Molecular and atomic hydrogen (HI+H2) galaxy contents, is_primary for 135, i.e, hih2_galaxy_135.hdf5) only have 184792 galaxies, in my files I have 237102 galaxies with mass different zero, where I can find the information of all galaxies?
Thanks in advance!
Dylan Nelson
29 Jun '19
Hello,
I'm not sure if you mean (i) classify centrals vs. satellites, or (ii) get molecular/atomic masses?
If (i), then you should use directly GroupFirstSub from the group catalogs, which provides, by definition, a list of all central subhalos.
Yeimy dallana Camargo camargo
29 Jun '19
HI Dylan,
GroupFirstSub - int32 N - Index into the Subhalo table of the first/primary/most massive Subfind group within this FoF group. Note: This value is signed (or should be interpreted as signed)! In this case, a value of -1 indicates that this FoF group has no subhalos.
I need to find a way to classify Galaxies centrals vs satellite inside a subhalo, I'm not sure how to use GroupFirstSub for this purpose.
Thanks
Dylan Nelson
30 Jun '19
Hi Yeimy,
The array GroupFirstSub, excluding -1 entries, provides a list of all central subhalos. Any subhalo not referenced here is a satellite.
Yeimy dallana Camargo camargo
1 Jul '19
Hi Dylan,
Ok, it's clear, my doubt is around the numbers in GroupFirstSub files and the quantity of SubHaloMass , groupfirstsub is always much bigger than number of subhalos, for example:
Illustris-3
len(GroupFirstSub) = 131727 (at line 42658 into groups_135.0.hdf5 appear the number 4294967295 and so on, what does it mean?)
len(SubhaloMass)= 121209
Illustris-1
len(GroupFirstSub) = 7713601
len(SubhaloMass)= 4366546
len(GroupFirstSub) shouldn't be less than len(SubhaloMass)?
The number of central subhalos can be greater or equal to all number of subhalos?
Dylan Nelson
2 Jul '19
Hi Yeimy,
First, the number 4294967295 is really -1, meaning no first sub. You can fix this by e.g. GroupFirstSub = GroupFirstSub.astype('int32') after loading.
Then, as you say, len(GroupFirstSub) gives the number of halos, while len(SubhaloMass) gives the number of subhalos. So, GroupFirstSub.max() < len(SubhaloMass), because it is the values of GroupFirstSub which index into SubhaloMass.
HI Dylan,
I need to classify central galaxies of satellite galaxies, in the documentation say that this information is in Supplementary Data Catalogs, Molecular and atomic hydrogen (HI+H2) galaxy contents, is_primary and is availble for TNG100-1, TNG100-2, TNG300-1, and Illustris-1. I download Illustris-1, but in this file (Molecular and atomic hydrogen (HI+H2) galaxy contents, is_primary for 135, i.e, hih2_galaxy_135.hdf5) only have 184792 galaxies, in my files I have 237102 galaxies with mass different zero, where I can find the information of all galaxies?
Thanks in advance!
Hello,
I'm not sure if you mean (i) classify centrals vs. satellites, or (ii) get molecular/atomic masses?
If (i), then you should use directly
GroupFirstSub
from the group catalogs, which provides, by definition, a list of all central subhalos.HI Dylan,
GroupFirstSub - int32 N - Index into the Subhalo table of the first/primary/most massive Subfind group within this FoF group. Note: This value is signed (or should be interpreted as signed)! In this case, a value of -1 indicates that this FoF group has no subhalos.
I need to find a way to classify Galaxies centrals vs satellite inside a subhalo, I'm not sure how to use GroupFirstSub for this purpose.
Thanks
Hi Yeimy,
The array
GroupFirstSub
, excluding -1 entries, provides a list of all central subhalos. Any subhalo not referenced here is a satellite.Hi Dylan,
Ok, it's clear, my doubt is around the numbers in GroupFirstSub files and the quantity of SubHaloMass , groupfirstsub is always much bigger than number of subhalos, for example:
Illustris-3
len(GroupFirstSub) = 131727 (at line 42658 into groups_135.0.hdf5 appear the number 4294967295 and so on, what does it mean?)
len(SubhaloMass)= 121209
Illustris-1
len(GroupFirstSub) = 7713601
len(SubhaloMass)= 4366546
len(GroupFirstSub) shouldn't be less than len(SubhaloMass)?
The number of central subhalos can be greater or equal to all number of subhalos?
Hi Yeimy,
First, the number
4294967295
is really-1
, meaning no first sub. You can fix this by e.g.GroupFirstSub = GroupFirstSub.astype('int32')
after loading.Then, as you say, len(GroupFirstSub) gives the number of halos, while len(SubhaloMass) gives the number of subhalos. So,
GroupFirstSub.max() < len(SubhaloMass)
, because it is the values of GroupFirstSub which index into SubhaloMass.